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Homeobox Family Description Reference ClustAlW Alignment Hidden Markov Model Nucleotide Sequences Protein Sequences

Dr. Daniel Gonzalez from Universidad Nacional Del Litoral, Argentina has kindly provided feedback for Homeobox family transcription factor

(T)IGR <> (M)IPS <> (S)ALK <> T(A)IR
(C)onfirmed direct targets (U)nconfirmed direct targets

There are currently 102 members identified for this family
TF Locus Id Protein Name Sub Family Gene Name , Synonym Links Sequences BindingSites/NFM Direct Targets Total Direct Interactions
At4g32980 BEL ATH1 T, M, S, A Nucl-Prot   VIEW (2)
At5g41410 BEL BEL1 T, M, S, A Nucl-Prot    
At4g36870 BEL BLH2, SAW1 T, M, S, A Nucl-Prot   VIEW (1)
At1g75410 BEL BLH3 T, M, S, A Nucl-Prot    
At2g23760 BEL BLH4, SAW2 T, M, S, A Nucl-Prot   VIEW (1)
At1g19700 BEL BEL10, BLH10, BLH5 T, M, S, A Nucl-Prot   VIEW (1)
At5g02030 BEL BLH9, BLR, HB-6, LSN, PNY, RPL, VAN T, M, S, A Nucl-Prot  C(1)VIEW (1)
At2g35940 BEL BLH1, EDA29 T, M, S, A Nucl-Prot    
At2g27220 BEL BLH5 T, M, S, A Nucl-Prot    
At1g75430 BEL BLH11 T, M, S, A Nucl-Prot   VIEW (1)
At2g16400 BEL BLH7 T, M, S, A Nucl-Prot   VIEW (1)
At4g34610 BEL BLH6 T, M, S, A Nucl-Prot   VIEW (1)
At2g27990 BEL BLH8, PNF, POUND-FOOLISH T, M, S, A Nucl-Prot    
At3g01470 HD-Zip I ATHB-1, ATHB1, HAT5, HD-ZIP-1 T, M, S, A Nucl-Prot   VIEW (1)
At3g61890 HD-Zip I ATHB-12, ATHB12 T, M, S, A Nucl-Prot    
At1g69780 HD-Zip I ATHB13 T, M, S, A Nucl-Prot    
At4g40060 HD-Zip I ATHB-16, ATHB16 T, M, S, A Nucl-Prot    
At5g15150 HD-Zip I ATHB-3, ATHB3, HAT7 T, M, S, A Nucl-Prot    
At5g65310 HD-Zip I ATHB-5, ATHB5 T, M, S, A Nucl-Prot   VIEW (1)
At2g22430 HD-Zip I ATHB6 T, M, S, A Nucl-Prot    
At2g46680 HD-Zip I ATHB-7, ATHB7 T, M, S, A Nucl-Prot   VIEW (1)
At4g36740 HD-Zip I ATHB40, HB-5 T, M, S, A Nucl-Prot   VIEW (1)
At2g36610 HD-Zip I ATHB22 T, M, S, A Nucl-Prot    
At3g01220 HD-Zip I ATHB20 T, M, S, A Nucl-Prot    
At5g03790 HD-Zip I ATHB51, LMI1 T, M, S, A Nucl-Prot  U(1) VIEW (3)
At1g27050 HD-Zip I ATHB54 T, M, S, A Nucl-Prot   VIEW (1)
At1g26960 HD-Zip I AtHB23 T, M, S, A Nucl-Prot   VIEW (1)
At5g66700 HD-Zip I ATHB53, HB-8, HB53 T, M, S, A Nucl-Prot   VIEW (1)
At5g53980 HD-Zip I ATHB52 T, M, S, A Nucl-Prot    
At2g18550 HD-Zip I ATHB21, HB-2 T, M, S, A Nucl-Prot    
At2g01430 HD-Zip II ATHB-17, ATHB17 T, M, S, A Nucl-Prot    
At4g16780 HD-Zip II ATHB-2, ATHB2, HAT4 T, M, S, A Nucl-Prot   VIEW (2)
At2g44910 HD-Zip II ATHB-4, ATHB4 T, M, S, A Nucl-Prot   VIEW (2)
At4g17460 HD-Zip II HAT1 T, M, S, A Nucl-Prot   VIEW (2)
At5g06710 HD-Zip II HAT14 T, M, S, A Nucl-Prot    
At5g47370 HD-Zip II HAT2 T, M, S, A Nucl-Prot   VIEW (2)
At4g37790 HD-Zip II HAT22 T, M, S, A Nucl-Prot   VIEW (1)
At3g60390 HD-Zip II HAT3 T, M, S, A Nucl-Prot   VIEW (1)
At2g22800 HD-Zip II HAT9 T, M, S, A Nucl-Prot   VIEW (1)
At1g70920 HD-Zip II ATHB18 T, M, S, A Nucl-Prot   VIEW (1)
At2g34710 HD-Zip III ATHB-14, ATHB14, PHB, PHB-1D T, M, S, A Nucl-Prot   VIEW (1)
At1g52150 HD-Zip III ATHB-15, ATHB15, CAN, CNA, ICU4 T, M, S, A Nucl-Prot    
At4g32880 HD-Zip III ATHB-8, ATHB8 T, M, S, A Nucl-Prot    
At1g30490 HD-Zip III ATHB9, PHV T, M, S, A Nucl-Prot   VIEW (2)
At5g60690 HD-Zip III IFL, IFL1, REV T, M, S, A Nucl-Prot    
At4g00730 HD-Zip IV AHDP, ANL2 T, M, S, A Nucl-Prot   VIEW (1)
At1g79840 HD-Zip IV GL2 T, M, S, A Nucl-Prot  C(1)VIEW (4)
At4g21750 HD-Zip IV ATML1 T, M, S, A Nucl-Prot   VIEW (1)
At4g25530 HD-Zip IV FWA, HDG6 T, M, S, A Nucl-Prot    
At3g61150 HD-Zip IV HD-GL2-1, HDG1 T, M, S, A Nucl-Prot   VIEW (1)
At2g32370 HD-Zip IV HDG3 T, M, S, A Nucl-Prot    
At1g73360 HD-Zip IV ATHDG11, EDT1, HDG11 T, M, S, A Nucl-Prot    
At1g05230 HD-Zip IV HDG2 T, M, S, A Nucl-Prot   VIEW (1)
At4g17710 HD-Zip IV HDG4 T, M, S, A Nucl-Prot    
At1g34650 HD-Zip IV HDG10 T, M, S, A Nucl-Prot    
At3g03260 HD-Zip IV HDG8 T, M, S, A Nucl-Prot   VIEW (1)
At5g17320 HD-Zip IV HDG9 T, M, S, A Nucl-Prot    
At5g46880 HD-Zip IV HB-7, HDG5 T, M, S, A Nucl-Prot    
At5g52170 HD-Zip IV HDG7 T, M, S, A Nucl-Prot   VIEW (1)
At1g17920 HD-Zip IV HDG12 T, M, S, A Nucl-Prot    
At4g04890 HD-Zip IV PDF2 T, M, S, A Nucl-Prot    
At4g08150 KNOX I BP, BP1, KNAT1 T, M, S, A Nucl-Prot  C(3)VIEW (4)
At1g70510 KNOX I ATK1, KNAT2 T, M, S, A Nucl-Prot   VIEW (1)
At1g23380 KNOX I KNAT6, KNAT6L, KNAT6S T, M, S, A Nucl-Prot   VIEW (1)
At1g62360 KNOX I BUM, BUM1, SHL, STM, WAM, WAM1 T, M, S, A Nucl-Prot    
At5g25220 KNOX II KNAT3 T, M, S, A Nucl-Prot   VIEW (2)
At5g11060 KNOX II KNAT4 T, M, S, A Nucl-Prot   VIEW (1)
At4g32040 KNOX II KNAT5 T, M, S, A Nucl-Prot    
At1g62990 KNOX II IXR11, KNAT7 T, M, S, A Nucl-Prot   VIEW (1)
At4g02560 LD LD T, M, S, A Nucl-Prot   VIEW (1)
At3g19510 PHD-finger HAT3.1 T, M, S, A Nucl-Prot    
At4g29940 PHD-finger PRHA T, M, S, A Nucl-Prot bindingsites VIEW (1)
At5g44180 Similar to HOX7 (tomato)   T, M, S, A Nucl-Prot    
At1g28420 Similar to HOX7 (tomato) HB-1 T, M, S, A Nucl-Prot    
At4g03250 Similar to HOX7 (tomato) HOX7, Similar, to T, M, S, A Nucl-Prot    
At5g46010 WOX   T, M, S, A Nucl-Prot    
At3g18010 WOX WOX1 T, M, S, A Nucl-Prot   VIEW (1)
At1g20710 WOX WOX10 T, M, S, A Nucl-Prot    
At3g03660 WOX WOX11 T, M, S, A Nucl-Prot    
At5g17810 WOX WOX12 T, M, S, A Nucl-Prot    
At4g35550 WOX HB-4, WOX13 T, M, S, A Nucl-Prot    
At1g20700 WOX ATWOX14, PALE2, WOX14 T, M, S, A Nucl-Prot    
At5g59340 WOX WOX2 T, M, S, A Nucl-Prot    
At2g28610 WOX PRS, PRS1, WOX3 T, M, S, A Nucl-Prot   VIEW (1)
At1g46480 WOX WOX4 T, M, S, A Nucl-Prot    
At3g11260 WOX WOX5 T, M, S, A Nucl-Prot    
At2g01500 WOX HOS9, PFS2, WOX6 T, M, S, A Nucl-Prot   VIEW (1)
At5g05770 WOX WOX7 T, M, S, A Nucl-Prot    
At5g45980 WOX STPL, WOX8 T, M, S, A Nucl-Prot    
At2g33880 WOX HB-3, STIMPY, STIP, WOX9 T, M, S, A Nucl-Prot    
At2g17950 WOX PGA6, WUS, WUS1, WUSCHEL T, M, S, A Nucl-Prot  C(1)VIEW (2)
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