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C2H2 Family
Description
Reference
ClustAlW Alignment
Hidden Markov Model
Nucleotide Sequences
Protein Sequences
(T)IGR <> (M)IPS <> (S)ALK <> T(A)IR
(C)onfirmed direct targets (U)nconfirmed direct targets
There are currently 211 members identified for this family
TF Locus Id
Protein Name
Sub Family
Gene Name , Synonym
Links
Sequences
BindingSites/NFM
Direct Targets
Total Direct Interactions
At3g57670
AtWIP2
NTT
T
,
M
,
S
,
A
Nucl
-
Prot
At1g08290
AtWIP3
T
,
M
,
S
,
A
Nucl
-
Prot
At3g20880
AtWIP4
T
,
M
,
S
,
A
Nucl
-
Prot
At1g51220
AtWIP5
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g13290
AtWIP6
DOT5
T
,
M
,
S
,
A
Nucl
-
Prot
At1g49900
ATZF1
T
,
M
,
S
,
A
Nucl
-
Prot
At5g67450
AZF1
T
,
M
,
S
,
A
Nucl
-
Prot
At3g19580
AZF2
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (2)
At5g43170
AZF3
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g04240
ELF6
T
,
M
,
S
,
A
Nucl
-
Prot
At5g51230
CYR1, EMF2, VEF2
T
,
M
,
S
,
A
Nucl
-
Prot
At1g08890
ERD6
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g08900
ERD6
T
,
M
,
S
,
A
Nucl
-
Prot
At2g35670
FIE2, FIS2
T
,
M
,
S
,
A
Nucl
-
Prot
At2g24500
FZF
T
,
M
,
S
,
A
Nucl
-
Prot
At1g25250
AtIDD16, ID1
T
,
M
,
S
,
A
Nucl
-
Prot
At1g68480
JAG
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g13400
JGL, NUB
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g14010
KNU
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g12330
LRP1
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g05400
T
,
M
,
S
,
A
Nucl
-
Prot
At1g54720
T
,
M
,
S
,
A
Nucl
-
Prot
At3g05155
T
,
M
,
S
,
A
Nucl
-
Prot
At1g43850
SEU
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g48890
T
,
M
,
S
,
A
Nucl
-
Prot
At5g60470
T
,
M
,
S
,
A
Nucl
-
Prot
At1g03840
MGP
T
,
M
,
S
,
A
Nucl
-
Prot
At5g44160
NUC
T
,
M
,
S
,
A
Nucl
-
Prot
At2g02070
AtIDD5
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At2g02080
AtIDD4
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At4g02670
AtIDD12
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g05150
T
,
M
,
S
,
A
Nucl
-
Prot
At3g05160
T
,
M
,
S
,
A
Nucl
-
Prot
At3g49930
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g10470
T
,
M
,
S
,
A
Nucl
-
Prot
At3g23140
T
,
M
,
S
,
A
Nucl
-
Prot
At5g05120
T
,
M
,
S
,
A
Nucl
-
Prot
At3g53820
T
,
M
,
S
,
A
Nucl
-
Prot
At5g43540
T
,
M
,
S
,
A
Nucl
-
Prot
At4g17810
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g24630
T
,
M
,
S
,
A
Nucl
-
Prot
At5g03150
JKD
T
,
M
,
S
,
A
Nucl
-
Prot
At5g01310
T
,
M
,
S
,
A
Nucl
-
Prot
At2g28710
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g48430
REF6
T
,
M
,
S
,
A
Nucl
-
Prot
At5g42640
T
,
M
,
S
,
A
Nucl
-
Prot
At5g22990
T
,
M
,
S
,
A
Nucl
-
Prot
At3g27970
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g02040
T
,
M
,
S
,
A
Nucl
-
Prot
At1g14580
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g19140
T
,
M
,
S
,
A
Nucl
-
Prot
At3g45260
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g46070
T
,
M
,
S
,
A
Nucl
-
Prot
At3g46080
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g50700
AtIDD2
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g52800
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g53600
T
,
M
,
S
,
A
Nucl
-
Prot
At3g58070
GIS
T
,
M
,
S
,
A
Nucl
-
Prot
At3g18290
EMB2454
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g07940
T
,
M
,
S
,
A
Nucl
-
Prot
At1g29570
T
,
M
,
S
,
A
Nucl
-
Prot
At1g29600
T
,
M
,
S
,
A
Nucl
-
Prot
At1g34370
STOP1
T
,
M
,
S
,
A
Nucl
-
Prot
At1g36950
T
,
M
,
S
,
A
Nucl
-
Prot
At1g55110
AtIDD7
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g70790
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (2)
At3g13810
AtIDD11
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g14740
T
,
M
,
S
,
A
Nucl
-
Prot
At3g60580
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At4g21160
AGD12, ZAC
T
,
M
,
S
,
A
Nucl
-
Prot
At4g05330
AGD13
T
,
M
,
S
,
A
Nucl
-
Prot
At5g22480
T
,
M
,
S
,
A
Nucl
-
Prot
At5g40710
T
,
M
,
S
,
A
Nucl
-
Prot
At5g66730
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (2)
At2g32930
ZFN2
T
,
M
,
S
,
A
Nucl
-
Prot
At5g04340
C2H2, CZF2, ZAT6
T
,
M
,
S
,
A
Nucl
-
Prot
At1g68360
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g01860
T
,
M
,
S
,
A
Nucl
-
Prot
At5g27880
T
,
M
,
S
,
A
Nucl
-
Prot
At5g39550
ORTH1, VIM3
T
,
M
,
S
,
A
Nucl
-
Prot
At5g40310
T
,
M
,
S
,
A
Nucl
-
Prot
At5g04390
T
,
M
,
S
,
A
Nucl
-
Prot
At5g16540
ZFN3
T
,
M
,
S
,
A
Nucl
-
Prot
At5g12850
T
,
M
,
S
,
A
Nucl
-
Prot
At5g10970
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g06650
GIS2
T
,
M
,
S
,
A
Nucl
-
Prot
At5g07500
PEI1
T
,
M
,
S
,
A
Nucl
-
Prot
At5g20220
T
,
M
,
S
,
A
Nucl
-
Prot
At5g18550
T
,
M
,
S
,
A
Nucl
-
Prot
At5g03510
T
,
M
,
S
,
A
Nucl
-
Prot
At1g65120
T
,
M
,
S
,
A
Nucl
-
Prot
At5g61950
T
,
M
,
S
,
A
Nucl
-
Prot
At1g52430
T
,
M
,
S
,
A
Nucl
-
Prot
At1g52450
T
,
M
,
S
,
A
Nucl
-
Prot
At4g26030
T
,
M
,
S
,
A
Nucl
-
Prot
At4g12240
T
,
M
,
S
,
A
Nucl
-
Prot
At5g52010
T
,
M
,
S
,
A
Nucl
-
Prot
At3g44750
ATHD2A, HD2A, HDA3, HDT1
T
,
M
,
S
,
A
Nucl
-
Prot
At5g03740
HD2C, HDT3
T
,
M
,
S
,
A
Nucl
-
Prot
At3g02790
T
,
M
,
S
,
A
Nucl
-
Prot
At5g16470
T
,
M
,
S
,
A
Nucl
-
Prot
At5g61940
T
,
M
,
S
,
A
Nucl
-
Prot
At3g47890
T
,
M
,
S
,
A
Nucl
-
Prot
At1g65130
T
,
M
,
S
,
A
Nucl
-
Prot
At1g65200
T
,
M
,
S
,
A
Nucl
-
Prot
At2g27630
T
,
M
,
S
,
A
Nucl
-
Prot
At2g27650
T
,
M
,
S
,
A
Nucl
-
Prot
At2g34220
MEE20
T
,
M
,
S
,
A
Nucl
-
Prot
At2g34230
T
,
M
,
S
,
A
Nucl
-
Prot
At2g34240
T
,
M
,
S
,
A
Nucl
-
Prot
At5g51530
T
,
M
,
S
,
A
Nucl
-
Prot
At5g02660
T
,
M
,
S
,
A
Nucl
-
Prot
At3g47910
T
,
M
,
S
,
A
Nucl
-
Prot
At3g57480
T
,
M
,
S
,
A
Nucl
-
Prot
At2g41835
T
,
M
,
S
,
A
Nucl
-
Prot
At1g04445
T
,
M
,
S
,
A
Nucl
-
Prot
At1g43860
T
,
M
,
S
,
A
Nucl
-
Prot
At1g55460
T
,
M
,
S
,
A
Nucl
-
Prot
At3g05760
T
,
M
,
S
,
A
Nucl
-
Prot
At2g32600
T
,
M
,
S
,
A
Nucl
-
Prot
At5g06160
ATO
T
,
M
,
S
,
A
Nucl
-
Prot
At2g27760
ATIPT2, IPPT
T
,
M
,
S
,
A
Nucl
-
Prot
At1g74250
T
,
M
,
S
,
A
Nucl
-
Prot
At2g36930
T
,
M
,
S
,
A
Nucl
-
Prot
At1g04850
T
,
M
,
S
,
A
Nucl
-
Prot
At4g31420
T
,
M
,
S
,
A
Nucl
-
Prot
At1g01930
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g02860
T
,
M
,
S
,
A
Nucl
-
Prot
At3g01460
MBD9
T
,
M
,
S
,
A
Nucl
-
Prot
At1g50670
T
,
M
,
S
,
A
Nucl
-
Prot
AT5G63280
T
,
M
,
S
,
A
Nucl
-
Prot
At5g01160
T
,
M
,
S
,
A
Nucl
-
Prot
At3g12270
ATPRMT3, PRMT3
T
,
M
,
S
,
A
Nucl
-
Prot
At2g48100
T
,
M
,
S
,
A
Nucl
-
Prot
At1g01350
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g62850
T
,
M
,
S
,
A
Nucl
-
Prot
At5g61190
T
,
M
,
S
,
A
Nucl
-
Prot
At5g26610
T
,
M
,
S
,
A
Nucl
-
Prot
At2g19380
T
,
M
,
S
,
A
Nucl
-
Prot
At2g47090
T
,
M
,
S
,
A
Nucl
-
Prot
At5g09740
HAM2
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At2g01650
PUX2
T
,
M
,
S
,
A
Nucl
-
Prot
At4g25610
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At2g26940
T
,
M
,
S
,
A
Nucl
-
Prot
At4g04404
T
,
M
,
S
,
A
Nucl
-
Prot
At3g01030
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At2g01940
ATIDD15, SGR5
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g15480
T
,
M
,
S
,
A
Nucl
-
Prot
At2g23740
T
,
M
,
S
,
A
Nucl
-
Prot
At5g14140
T
,
M
,
S
,
A
Nucl
-
Prot
At4g06634
T
,
M
,
S
,
A
Nucl
-
Prot
At2g15740
T
,
M
,
S
,
A
Nucl
-
Prot
At2g18490
T
,
M
,
S
,
A
Nucl
-
Prot
At1g30970
SUF4
T
,
M
,
S
,
A
Nucl
-
Prot
At2g36475
T
,
M
,
S
,
A
Nucl
-
Prot
At4g04885
PCFS4
T
,
M
,
S
,
A
Nucl
-
Prot
At5g43620
T
,
M
,
S
,
A
Nucl
-
Prot
At3g62240
T
,
M
,
S
,
A
Nucl
-
Prot
At3g29340
T
,
M
,
S
,
A
Nucl
-
Prot
At1g68130
AtIDD14
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g22890
T
,
M
,
S
,
A
Nucl
-
Prot
At4g27240
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g54630
T
,
M
,
S
,
A
Nucl
-
Prot
At2g17180
T
,
M
,
S
,
A
Nucl
-
Prot
At5g61470
T
,
M
,
S
,
A
Nucl
-
Prot
At2g45120
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At5g64610
HAM1
T
,
M
,
S
,
A
Nucl
-
Prot
At1g65110
T
,
M
,
S
,
A
Nucl
-
Prot
At2g29660
T
,
M
,
S
,
A
Nucl
-
Prot
At1g66500
T
,
M
,
S
,
A
Nucl
-
Prot
At1g75710
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g26590
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g47860
T
,
M
,
S
,
A
Nucl
-
Prot
At1g56200
emb1303
T
,
M
,
S
,
A
Nucl
-
Prot
At1g11490
T
,
M
,
S
,
A
Nucl
-
Prot
At4g35280
T
,
M
,
S
,
A
Nucl
-
Prot
At1g26610
T
,
M
,
S
,
A
Nucl
-
Prot
At3g28210
PMZ
T
,
M
,
S
,
A
Nucl
-
Prot
At5g06070
RAB, RBE
T
,
M
,
S
,
A
Nucl
-
Prot
At2g27100
SE
T
,
M
,
S
,
A
Nucl
-
Prot
At5g66350
INTERNODES, SHI, SHORT
T
,
M
,
S
,
A
Nucl
-
Prot
At2g21400
SRS3
T
,
M
,
S
,
A
Nucl
-
Prot
At2g18120
SRS4
T
,
M
,
S
,
A
Nucl
-
Prot
At1g75520
SRS5
T
,
M
,
S
,
A
Nucl
-
Prot
At3g54430
SRS6
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g19790
SRS7
T
,
M
,
S
,
A
Nucl
-
Prot
At5g33210
SRS8
T
,
M
,
S
,
A
Nucl
-
Prot
At3g51060
SRS1, STY1
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At4g36260
SRS2, STY2
T
,
M
,
S
,
A
Nucl
-
Prot
At3g23130
FLO10, FON1, SUP
T
,
M
,
S
,
A
Nucl
-
Prot
C
(1)
VIEW (4)
At3g09290
TAC1
T
,
M
,
S
,
A
Nucl
-
Prot
At1g72050
TF3A
T
,
M
,
S
,
A
Nucl
-
Prot
At1g34790
TT1
T
,
M
,
S
,
A
Nucl
-
Prot
At4g16845
VRN2
T
,
M
,
S
,
A
Nucl
-
Prot
At1g02030
ZAT1
T
,
M
,
S
,
A
Nucl
-
Prot
At1g27730
STZ, ZAT10
T
,
M
,
S
,
A
Nucl
-
Prot
At2g37430
ZAT11
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (2)
At5g59820
RHL41, ZAT12
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (3)
At2g28200
ZAT5
T
,
M
,
S
,
A
Nucl
-
Prot
At3g46090
ZAT7, ZAT72
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At3g02830
ZFN1
T
,
M
,
S
,
A
Nucl
-
Prot
At1g80730
ATZFP1, ZFP1
T
,
M
,
S
,
A
Nucl
-
Prot
At2g37740
ATZFP10, ZFP10
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At2g42410
ATZFP11, ZFP11
T
,
M
,
S
,
A
Nucl
-
Prot
At5g57520
ATZFP2, ZFP2
T
,
M
,
S
,
A
Nucl
-
Prot
At5g25160
ZFP3
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g66140
ZFP4
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
At1g10480
ZFP5
T
,
M
,
S
,
A
Nucl
-
Prot
At1g67030
ZFP6
T
,
M
,
S
,
A
Nucl
-
Prot
At1g24625
ZFP7
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (2)
At2g41940
ZFP8
T
,
M
,
S
,
A
Nucl
-
Prot
VIEW (1)
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